||A web server for the analysis of the correspondonce of protein structural ensembles reflecting internal dynamics to measured NMR parameters.
Contains a simple (greedy) algorithm for
selecting a sub-ensemble that corresponds best to user-selected parameters
||A web server for the prediction of single α-helices in protein sequences
|PRIDE2 & PRIDE-NMR
||PRIDE2 is a fast protein structure comparison method. PRIDE-NMR allows protein fold estimation based on intrabackbone NMR distance restraints
|S2 restraining for GROMACS 4.5.5
||These modifications allow ensemble restraining using experimentally determined S2 order parameters in GROMACS as an implementation of the approach described in Best & Vendruscolo 2004. Also supports pairwise averaging of NOE distance restraints over replicas (similar to the concept of the MUMO approach, Richter et al. 2007). The current 4.5.5 version contains a basic AMD scheme for the dihedral energy term (Wang & McCammon 2012). This version was used in the Fizil et al. 2015 paper.
|S2 restraining for GROMACS 3.1.1